Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
ATXN3P54252 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATXN3P54252 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.2■□□□□ 0.18
ATXN3P54252 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ATXN3P54252 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATXN3P54252 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ATXN3P54252 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.19■□□□□ 0.18
ATXN3P54252 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.19■□□□□ 0.18
ATXN3P54252 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.19■□□□□ 0.18
ATXN3P54252 SERBP1P3-201ENST00000459980 809 ntBASIC16.19■□□□□ 0.18
ATXN3P54252 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.19■□□□□ 0.18
ATXN3P54252 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.19■□□□□ 0.18
ATXN3P54252 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.19■□□□□ 0.18
ATXN3P54252 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.19■□□□□ 0.18
ATXN3P54252 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.19■□□□□ 0.18
ATXN3P54252 AC007431.3-201ENST00000623221 587 ntBASIC16.19■□□□□ 0.18
ATXN3P54252 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATXN3P54252 AC067930.6-201ENST00000623257 4947 ntBASIC16.19■□□□□ 0.18
ATXN3P54252 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.19■□□□□ 0.18
ATXN3P54252 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 AL161772.1-201ENST00000610494 4412 ntBASIC16.18■□□□□ 0.18
ATXN3P54252 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 AC073439.1-201ENST00000624121 1774 ntBASIC16.18■□□□□ 0.18
ATXN3P54252 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.18■□□□□ 0.18
ATXN3P54252 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ATXN3P54252 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATXN3P54252 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.18■□□□□ 0.18
ATXN3P54252 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.18■□□□□ 0.18
ATXN3P54252 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.18■□□□□ 0.18
ATXN3P54252 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.18■□□□□ 0.18
ATXN3P54252 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.18■□□□□ 0.18
ATXN3P54252 MIR4492-201ENST00000581627 80 ntBASIC16.18■□□□□ 0.18
ATXN3P54252 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.18■□□□□ 0.18
ATXN3P54252 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.18■□□□□ 0.18
ATXN3P54252 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.18■□□□□ 0.18
ATXN3P54252 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ATXN3P54252 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATXN3P54252 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms