Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.37■□□□□ 0.37
LBX1P52954 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.37■□□□□ 0.37
LBX1P52954 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.37■□□□□ 0.37
LBX1P52954 AC093752.3-201ENST00000567343 901 ntBASIC17.37■□□□□ 0.37
LBX1P52954 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.37■□□□□ 0.37
LBX1P52954 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LBX1P52954 AC011471.3-201ENST00000623576 402 ntBASIC17.37■□□□□ 0.37
LBX1P52954 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LBX1P52954 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LBX1P52954 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
LBX1P52954 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LBX1P52954 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.36■□□□□ 0.37
LBX1P52954 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.36■□□□□ 0.37
LBX1P52954 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LBX1P52954 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.36■□□□□ 0.37
LBX1P52954 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.36■□□□□ 0.37
LBX1P52954 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.36■□□□□ 0.37
LBX1P52954 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.36■□□□□ 0.37
LBX1P52954 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.36■□□□□ 0.37
LBX1P52954 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.36■□□□□ 0.37
LBX1P52954 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.36■□□□□ 0.37
LBX1P52954 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.36■□□□□ 0.37
LBX1P52954 E2F3P2-201ENST00000447755 1422 ntBASIC17.36■□□□□ 0.37
LBX1P52954 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LBX1P52954 AP001282.1-201ENST00000531301 1499 ntBASIC17.36■□□□□ 0.37
LBX1P52954 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LBX1P52954 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.36■□□□□ 0.37
LBX1P52954 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LBX1P52954 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.35■□□□□ 0.37
LBX1P52954 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LBX1P52954 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LBX1P52954 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.35■□□□□ 0.37
LBX1P52954 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.35■□□□□ 0.37
LBX1P52954 FAM58BP-201ENST00000439056 645 ntBASIC17.35■□□□□ 0.37
LBX1P52954 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.35■□□□□ 0.37
LBX1P52954 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.35■□□□□ 0.37
LBX1P52954 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.35■□□□□ 0.37
LBX1P52954 AC027237.1-201ENST00000560942 655 ntBASIC17.35■□□□□ 0.37
LBX1P52954 ABHD17AP9-201ENST00000561925 548 ntBASIC17.35■□□□□ 0.37
LBX1P52954 DUX4L46-201ENST00000566845 751 ntBASIC17.35■□□□□ 0.37
LBX1P52954 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 AC012073.1-201ENST00000606114 1108 ntBASIC17.35■□□□□ 0.37
LBX1P52954 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 CLUHP2-201ENST00000426660 1303 ntBASIC17.35■□□□□ 0.37
LBX1P52954 FRMPD2B-201ENST00000431305 1347 ntBASIC17.35■□□□□ 0.37
LBX1P52954 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LBX1P52954 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 MBLAC2-202ENST00000514906 1936 ntBASIC17.35■□□□□ 0.37
LBX1P52954 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LBX1P52954 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.35■□□□□ 0.37
LBX1P52954 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LBX1P52954 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LBX1P52954 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LBX1P52954 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.34■□□□□ 0.37
LBX1P52954 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LBX1P52954 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms