Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16■□□□□ 0.15
HADHAP40939 CNN2P2-201ENST00000443536 909 ntBASIC16■□□□□ 0.15
HADHAP40939 CNN2P3-201ENST00000450201 906 ntBASIC16■□□□□ 0.15
HADHAP40939 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16■□□□□ 0.15
HADHAP40939 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16■□□□□ 0.15
HADHAP40939 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16■□□□□ 0.15
HADHAP40939 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HADHAP40939 AL136317.3-201ENST00000618497 906 ntBASIC16■□□□□ 0.15
HADHAP40939 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16■□□□□ 0.15
HADHAP40939 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16■□□□□ 0.15
HADHAP40939 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16■□□□□ 0.15
HADHAP40939 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HADHAP40939 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HADHAP40939 AL109954.1-202ENST00000564051 2148 ntBASIC16■□□□□ 0.15
HADHAP40939 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16■□□□□ 0.15
HADHAP40939 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16■□□□□ 0.15
HADHAP40939 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HADHAP40939 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.99■□□□□ 0.15
HADHAP40939 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HADHAP40939 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.99■□□□□ 0.15
HADHAP40939 BANF1P1-201ENST00000553684 263 ntBASIC15.99■□□□□ 0.15
HADHAP40939 AC004449.1-201ENST00000564240 433 ntBASIC15.99■□□□□ 0.15
HADHAP40939 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HADHAP40939 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.99■□□□□ 0.15
HADHAP40939 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HADHAP40939 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.99■□□□□ 0.15
HADHAP40939 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HADHAP40939 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.99■□□□□ 0.15
HADHAP40939 CICP13-201ENST00000422015 2789 ntBASIC15.98■□□□□ 0.15
HADHAP40939 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.98■□□□□ 0.15
HADHAP40939 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HADHAP40939 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.98■□□□□ 0.15
HADHAP40939 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.98■□□□□ 0.15
HADHAP40939 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 AC109322.1-201ENST00000524499 1264 ntBASIC15.98■□□□□ 0.15
HADHAP40939 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.98■□□□□ 0.15
HADHAP40939 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HADHAP40939 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.98■□□□□ 0.15
HADHAP40939 AC027796.2-201ENST00000575326 344 ntBASIC15.98■□□□□ 0.15
HADHAP40939 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HADHAP40939 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.98■□□□□ 0.15
HADHAP40939 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms