Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDE6BP35913 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PDE6BP35913 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PDE6BP35913 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6BP35913 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6BP35913 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.21■□□□□ 0.67
PDE6BP35913 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PDE6BP35913 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PDE6BP35913 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
PDE6BP35913 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6BP35913 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PDE6BP35913 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6BP35913 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE6BP35913 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
PDE6BP35913 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE6BP35913 NKAIN1P1-201ENST00000435754 582 ntBASIC19.2■□□□□ 0.66
PDE6BP35913 SERPINA13P-202ENST00000478994 924 ntBASIC19.2■□□□□ 0.66
PDE6BP35913 TMEM198B-204ENST00000484016 896 ntBASIC19.2■□□□□ 0.66
PDE6BP35913 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.2■□□□□ 0.66
PDE6BP35913 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 AC044849.1-201ENST00000519737 1188 ntBASIC19.2■□□□□ 0.66
PDE6BP35913 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PDE6BP35913 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6BP35913 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6BP35913 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PDE6BP35913 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6BP35913 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDE6BP35913 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6BP35913 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 AL008707.1-201ENST00000422498 534 ntBASIC19.19■□□□□ 0.66
PDE6BP35913 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.19■□□□□ 0.66
PDE6BP35913 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE6BP35913 RN7SL720P-201ENST00000488178 304 ntBASIC19.19■□□□□ 0.66
PDE6BP35913 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6BP35913 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6BP35913 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.19■□□□□ 0.66
PDE6BP35913 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.19■□□□□ 0.66
PDE6BP35913 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE6BP35913 MIR4313-201ENST00000580760 101 ntBASIC19.19■□□□□ 0.66
PDE6BP35913 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.19■□□□□ 0.66
PDE6BP35913 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PDE6BP35913 AP001505.2-201ENST00000616815 443 ntBASIC19.19■□□□□ 0.66
PDE6BP35913 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE6BP35913 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PDE6BP35913 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 AC006449.6-201ENST00000612330 2296 ntBASIC19.19■□□□□ 0.66
PDE6BP35913 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.19■□□□□ 0.66
PDE6BP35913 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PDE6BP35913 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6BP35913 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDE6BP35913 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDE6BP35913 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
PDE6BP35913 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6BP35913 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PDE6BP35913 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE6BP35913 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE6BP35913 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.18■□□□□ 0.66
PDE6BP35913 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDE6BP35913 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6BP35913 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms