Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 NME4-207ENST00000450036 985 ntTSL 3 BASIC15□□□□□ -0.01
RORAP35398 PHKG1P2-201ENST00000457537 863 ntBASIC15□□□□□ -0.01
RORAP35398 RN7SL837P-201ENST00000463010 287 ntBASIC15□□□□□ -0.01
RORAP35398 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15□□□□□ -0.01
RORAP35398 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15□□□□□ -0.01
RORAP35398 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 WFDC1-204ENST00000613603 549 ntBASIC15□□□□□ -0.01
RORAP35398 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15□□□□□ -0.01
RORAP35398 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15□□□□□ -0.01
RORAP35398 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RORAP35398 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RORAP35398 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15□□□□□ -0.01
RORAP35398 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RORAP35398 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 REXO1L1P-202ENST00000608646 1974 ntBASIC15□□□□□ -0.01
RORAP35398 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15□□□□□ -0.01
RORAP35398 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RORAP35398 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RORAP35398 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RORAP35398 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RORAP35398 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
RORAP35398 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RORAP35398 AC136604.1-201ENST00000418535 575 ntBASIC14.99□□□□□ -0.01
RORAP35398 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.99□□□□□ -0.01
RORAP35398 RN7SL399P-201ENST00000471648 279 ntBASIC14.99□□□□□ -0.01
RORAP35398 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.99□□□□□ -0.01
RORAP35398 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.99□□□□□ -0.01
RORAP35398 HNRNPUP1-201ENST00000554987 333 ntBASIC14.99□□□□□ -0.01
RORAP35398 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.99□□□□□ -0.01
RORAP35398 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.99□□□□□ -0.01
RORAP35398 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
RORAP35398 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RORAP35398 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RORAP35398 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 CDC14C-201ENST00000428251 1719 ntBASIC14.98□□□□□ -0.01
RORAP35398 AC011477.6-201ENST00000604980 1927 ntBASIC14.98□□□□□ -0.01
RORAP35398 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 DOC2GP-204ENST00000639052 2548 ntBASIC14.98□□□□□ -0.01
RORAP35398 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 CLK3P2-201ENST00000427566 1453 ntBASIC14.98□□□□□ -0.01
RORAP35398 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RORAP35398 ARSEP1-201ENST00000420443 635 ntBASIC14.98□□□□□ -0.01
RORAP35398 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.98□□□□□ -0.01
RORAP35398 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 AC104596.2-201ENST00000512793 793 ntBASIC14.98□□□□□ -0.01
RORAP35398 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.98□□□□□ -0.01
RORAP35398 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.98□□□□□ -0.01
RORAP35398 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RORAP35398 AC092552.1-201ENST00000547243 906 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms