Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC8P31273 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXC8P31273 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
HOXC8P31273 SAMD11P1-201ENST00000571429 661 ntBASIC16.93■□□□□ 0.3
HOXC8P31273 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC8P31273 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC8P31273 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXC8P31273 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXC8P31273 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC8P31273 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC8P31273 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC8P31273 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC8P31273 AL023775.1-201ENST00000454907 1746 ntBASIC16.93■□□□□ 0.3
HOXC8P31273 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC8P31273 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC8P31273 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC8P31273 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC8P31273 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HOXC8P31273 PRORSD1P-202ENST00000563365 2154 ntBASIC16.92■□□□□ 0.3
HOXC8P31273 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 AL354989.2-201ENST00000435838 1540 ntBASIC16.92■□□□□ 0.3
HOXC8P31273 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HOXC8P31273 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 AC245100.3-201ENST00000441281 285 ntBASIC16.92■□□□□ 0.3
HOXC8P31273 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HOXC8P31273 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.92■□□□□ 0.3
HOXC8P31273 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.92■□□□□ 0.3
HOXC8P31273 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HOXC8P31273 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC8P31273 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC8P31273 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXC8P31273 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 LRRC59-203ENST00000576448 1531 ntBASIC16.91■□□□□ 0.3
HOXC8P31273 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HOXC8P31273 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HOXC8P31273 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXC8P31273 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 AC104982.3-201ENST00000581995 514 ntBASIC16.91■□□□□ 0.3
HOXC8P31273 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HOXC8P31273 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXC8P31273 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXC8P31273 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC8P31273 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXC8P31273 BCL2-203ENST00000589955 5011 ntBASIC16.91■□□□□ 0.3
HOXC8P31273 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC8P31273 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC8P31273 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms