Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.54□□□□□ -0.24
TNFSF4P23510 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 BTBD7P1-201ENST00000447253 1453 ntBASIC13.54□□□□□ -0.24
TNFSF4P23510 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TNFSF4P23510 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 ZNF890P-202ENST00000530367 1156 ntBASIC13.53□□□□□ -0.24
TNFSF4P23510 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 AL390955.2-201ENST00000603032 514 ntBASIC13.53□□□□□ -0.24
TNFSF4P23510 AL096865.1-201ENST00000606796 927 ntBASIC13.53□□□□□ -0.24
TNFSF4P23510 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TNFSF4P23510 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TNFSF4P23510 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.53□□□□□ -0.24
TNFSF4P23510 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TNFSF4P23510 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
TNFSF4P23510 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
TNFSF4P23510 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.52□□□□□ -0.24
TNFSF4P23510 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TNFSF4P23510 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TNFSF4P23510 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TNFSF4P23510 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TNFSF4P23510 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TNFSF4P23510 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.52□□□□□ -0.24
TNFSF4P23510 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TNFSF4P23510 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TNFSF4P23510 AZGP1P1-201ENST00000411909 902 ntBASIC13.52□□□□□ -0.25
TNFSF4P23510 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.52□□□□□ -0.25
TNFSF4P23510 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.52□□□□□ -0.25
TNFSF4P23510 TIMM17BP1-201ENST00000545713 516 ntBASIC13.52□□□□□ -0.25
TNFSF4P23510 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.52□□□□□ -0.25
TNFSF4P23510 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.52□□□□□ -0.25
TNFSF4P23510 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms