Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.96□□□□□ -0.01
NCK1P16333 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.96□□□□□ -0.01
NCK1P16333 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NCK1P16333 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.96□□□□□ -0.01
NCK1P16333 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.96□□□□□ -0.01
NCK1P16333 AC026396.1-201ENST00000419388 421 ntBASIC14.96□□□□□ -0.01
NCK1P16333 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.96□□□□□ -0.01
NCK1P16333 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 PRYP6-201ENST00000514804 343 ntBASIC14.96□□□□□ -0.01
NCK1P16333 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.96□□□□□ -0.01
NCK1P16333 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.96□□□□□ -0.01
NCK1P16333 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.96□□□□□ -0.01
NCK1P16333 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NCK1P16333 AC104581.4-201ENST00000623126 3052 ntBASIC14.96□□□□□ -0.01
NCK1P16333 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.96□□□□□ -0.01
NCK1P16333 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCK1P16333 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.96□□□□□ -0.02
NCK1P16333 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.96□□□□□ -0.02
NCK1P16333 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.96□□□□□ -0.02
NCK1P16333 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCK1P16333 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NCK1P16333 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.95□□□□□ -0.02
NCK1P16333 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.95□□□□□ -0.02
NCK1P16333 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NCK1P16333 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.95□□□□□ -0.02
NCK1P16333 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.95□□□□□ -0.02
NCK1P16333 VN2R19P-201ENST00000442399 1052 ntBASIC14.95□□□□□ -0.02
NCK1P16333 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 AC010507.1-201ENST00000633895 436 ntBASIC14.95□□□□□ -0.02
NCK1P16333 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NCK1P16333 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NCK1P16333 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCK1P16333 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms