Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.29■□□□□ 0.36
CLTAP09496 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLTAP09496 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLTAP09496 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.29■□□□□ 0.36
CLTAP09496 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.29■□□□□ 0.36
CLTAP09496 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.29■□□□□ 0.36
CLTAP09496 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLTAP09496 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CLTAP09496 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 LINC02228-204ENST00000642115 2962 ntBASIC17.29■□□□□ 0.36
CLTAP09496 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.29■□□□□ 0.36
CLTAP09496 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLTAP09496 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.29■□□□□ 0.36
CLTAP09496 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.29■□□□□ 0.36
CLTAP09496 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.29■□□□□ 0.36
CLTAP09496 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLTAP09496 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.28■□□□□ 0.36
CLTAP09496 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.28■□□□□ 0.36
CLTAP09496 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.28■□□□□ 0.36
CLTAP09496 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLTAP09496 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLTAP09496 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.28■□□□□ 0.36
CLTAP09496 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.28■□□□□ 0.36
CLTAP09496 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.28■□□□□ 0.36
CLTAP09496 AC104794.3-201ENST00000566840 1248 ntBASIC17.28■□□□□ 0.36
CLTAP09496 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.28■□□□□ 0.36
CLTAP09496 LINC02084-201ENST00000606069 1096 ntBASIC17.28■□□□□ 0.36
CLTAP09496 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.28■□□□□ 0.36
CLTAP09496 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.28■□□□□ 0.36
CLTAP09496 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLTAP09496 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLTAP09496 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.27■□□□□ 0.36
CLTAP09496 AC136604.1-201ENST00000418535 575 ntBASIC17.27■□□□□ 0.36
CLTAP09496 TARDBPP1-201ENST00000442013 1203 ntBASIC17.27■□□□□ 0.36
CLTAP09496 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.27■□□□□ 0.36
CLTAP09496 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.27■□□□□ 0.36
CLTAP09496 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.27■□□□□ 0.36
CLTAP09496 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.27■□□□□ 0.36
CLTAP09496 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.27■□□□□ 0.36
CLTAP09496 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.27■□□□□ 0.36
CLTAP09496 AC004233.3-201ENST00000607794 1269 ntBASIC17.27■□□□□ 0.36
CLTAP09496 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms