Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA1P02708 MIR3615-201ENST00000581999 87 ntBASIC16.99■□□□□ 0.31
CHRNA1P02708 AC025181.2-201ENST00000606994 802 ntBASIC16.99■□□□□ 0.31
CHRNA1P02708 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 AC091271.1-201ENST00000611877 1162 ntBASIC16.99■□□□□ 0.31
CHRNA1P02708 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.99■□□□□ 0.31
CHRNA1P02708 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA1P02708 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA1P02708 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA1P02708 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA1P02708 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA1P02708 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA1P02708 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHRNA1P02708 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 AL590640.2-201ENST00000457038 527 ntBASIC16.98■□□□□ 0.31
CHRNA1P02708 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.98■□□□□ 0.31
CHRNA1P02708 AC103810.3-201ENST00000583567 96 ntBASIC16.98■□□□□ 0.31
CHRNA1P02708 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA1P02708 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA1P02708 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA1P02708 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CHRNA1P02708 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHRNA1P02708 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA1P02708 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA1P02708 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 LINC02447-202ENST00000501888 2146 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA1P02708 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 RNU1-114P-201ENST00000365297 166 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA1P02708 MIR1247-201ENST00000408206 136 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 GPAA1P2-201ENST00000417923 928 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 BCYRN1-201ENST00000418539 200 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA1P02708 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRNA1P02708 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA1P02708 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CHRNA1P02708 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA1P02708 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 PKD1P1-201ENST00000458669 6805 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA1P02708 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRNA1P02708 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.97■□□□□ 0.31
CHRNA1P02708 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
CHRNA1P02708 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms