Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.2□□□□□ -0.46
TRBV12-3P01733 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.2□□□□□ -0.46
TRBV12-3P01733 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.2□□□□□ -0.46
TRBV12-3P01733 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.2□□□□□ -0.46
TRBV12-3P01733 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRBV12-3P01733 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRBV12-3P01733 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.19□□□□□ -0.46
TRBV12-3P01733 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AL589987.1-201ENST00000453380 819 ntBASIC12.19□□□□□ -0.46
TRBV12-3P01733 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AC104794.3-201ENST00000566840 1248 ntBASIC12.19□□□□□ -0.46
TRBV12-3P01733 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRBV12-3P01733 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.19□□□□□ -0.46
TRBV12-3P01733 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 MIR661-201ENST00000384842 89 ntBASIC12.18□□□□□ -0.46
TRBV12-3P01733 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.18□□□□□ -0.46
TRBV12-3P01733 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TRBV12-3P01733 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms