Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.31■□□□□ 0.36
CD4P01730 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.31■□□□□ 0.36
CD4P01730 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD4P01730 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.31■□□□□ 0.36
CD4P01730 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 MIR648-201ENST00000385046 94 ntBASIC17.31■□□□□ 0.36
CD4P01730 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.31■□□□□ 0.36
CD4P01730 AC104306.2-201ENST00000451877 341 ntBASIC17.31■□□□□ 0.36
CD4P01730 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.31■□□□□ 0.36
CD4P01730 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.31■□□□□ 0.36
CD4P01730 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.31■□□□□ 0.36
CD4P01730 AC106872.11-201ENST00000605838 421 ntBASIC17.31■□□□□ 0.36
CD4P01730 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.31■□□□□ 0.36
CD4P01730 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.31■□□□□ 0.36
CD4P01730 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 AC134407.2-201ENST00000625089 1978 ntBASIC17.31■□□□□ 0.36
CD4P01730 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
CD4P01730 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.31■□□□□ 0.36
CD4P01730 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.31■□□□□ 0.36
CD4P01730 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD4P01730 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.31■□□□□ 0.36
CD4P01730 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
CD4P01730 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.3■□□□□ 0.36
CD4P01730 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.3■□□□□ 0.36
CD4P01730 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CD4P01730 FAM197Y7-201ENST00000432892 766 ntBASIC17.3■□□□□ 0.36
CD4P01730 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 Z93015.1-201ENST00000451718 390 ntBASIC17.3■□□□□ 0.36
CD4P01730 AL591846.1-201ENST00000451736 433 ntBASIC17.3■□□□□ 0.36
CD4P01730 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 AC078819.1-201ENST00000547454 765 ntBASIC17.3■□□□□ 0.36
CD4P01730 AC012085.1-201ENST00000548270 765 ntBASIC17.3■□□□□ 0.36
CD4P01730 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CD4P01730 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CD4P01730 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 MTHFR-217ENST00000641820 1569 ntBASIC17.3■□□□□ 0.36
CD4P01730 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.3■□□□□ 0.36
CD4P01730 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.3■□□□□ 0.36
CD4P01730 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD4P01730 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD4P01730 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD4P01730 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.29■□□□□ 0.36
CD4P01730 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.29■□□□□ 0.36
CD4P01730 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD4P01730 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.29■□□□□ 0.36
CD4P01730 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.29■□□□□ 0.36
CD4P01730 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CD4P01730 SLC25A24P2-201ENST00000415059 510 ntBASIC17.29■□□□□ 0.36
CD4P01730 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms