Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-CO1P00395 PIN1P1-201ENST00000412108 996 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 AC074338.1-201ENST00000416825 156 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.19■□□□□ 0.18
MT-CO1P00395 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
MT-CO1P00395 TARDBPP1-201ENST00000442013 1203 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 DOC2GP-202ENST00000514950 1163 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-CO1P00395 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.19■□□□□ 0.18
MT-CO1P00395 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.19■□□□□ 0.18
MT-CO1P00395 AC190387.1-201ENST00000551683 408 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-CO1P00395 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-CO1P00395 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 LINC01115-203ENST00000606068 577 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 AC074044.1-201ENST00000609673 707 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.19■□□□□ 0.18
MT-CO1P00395 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MT-CO1P00395 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 LINC02447-202ENST00000501888 2146 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 AL603832.2-201ENST00000566195 2125 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 AC015922.1-201ENST00000421102 1152 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 CRB3P1-201ENST00000449338 276 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
MT-CO1P00395 AL450472.2-201ENST00000603663 1156 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 AF228730.6-201ENST00000641497 218 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 AC084121.3-201ENST00000641716 218 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MT-CO1P00395 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-CO1P00395 AC144831.1-201ENST00000573312 2656 ntBASIC16.18■□□□□ 0.18
MT-CO1P00395 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
MT-CO1P00395 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-CO1P00395 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-CO1P00395 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-CO1P00395 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
MT-CO1P00395 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms