Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE3O75131 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE3O75131 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CPNE3O75131 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CPNE3O75131 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE3O75131 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPNE3O75131 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 AC138969.3-201ENST00000546612 1459 ntBASIC15.21■□□□□ 0.03
CPNE3O75131 AC138932.2-201ENST00000548268 1459 ntBASIC15.21■□□□□ 0.03
CPNE3O75131 AC126755.4-201ENST00000549796 1459 ntBASIC15.21■□□□□ 0.03
CPNE3O75131 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPNE3O75131 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
CPNE3O75131 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 GK-202ENST00000378941 458 ntTSL 3 BASIC15.21■□□□□ 0.03
CPNE3O75131 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.21■□□□□ 0.03
CPNE3O75131 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.21■□□□□ 0.03
CPNE3O75131 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC243562.2-201ENST00000561247 970 ntBASIC15.21■□□□□ 0.03
CPNE3O75131 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE3O75131 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 AL589935.2-201ENST00000616471 1231 ntBASIC15.21■□□□□ 0.03
CPNE3O75131 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CPNE3O75131 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE3O75131 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CPNE3O75131 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
CPNE3O75131 SLC7A15P-201ENST00000424028 1363 ntBASIC15.21■□□□□ 0.02
CPNE3O75131 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CPNE3O75131 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CPNE3O75131 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
CPNE3O75131 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
CPNE3O75131 TCAF2P1-201ENST00000291129 2421 ntBASIC15.21■□□□□ 0.02
CPNE3O75131 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CPNE3O75131 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE3O75131 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE3O75131 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 AC004987.2-201ENST00000395959 1148 ntBASIC15.2■□□□□ 0.02
CPNE3O75131 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 AP006294.1-201ENST00000415407 339 ntBASIC15.2■□□□□ 0.02
CPNE3O75131 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.2■□□□□ 0.02
CPNE3O75131 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.2■□□□□ 0.02
CPNE3O75131 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms