Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 MRPS18AP1-201ENST00000414458 589 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMARCA5O60264 AL589987.1-201ENST00000453380 819 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 AC093214.1-201ENST00000511688 1107 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 AC008738.7-201ENST00000609744 511 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.44■□□□□ 0.7
SMARCA5O60264 AC004790.1-201ENST00000612686 536 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 AC004840.1-201ENST00000636359 365 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 AC022532.1-201ENST00000624563 1728 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 TMBIM7P-203ENST00000641617 1718 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SMARCA5O60264 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCA5O60264 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCA5O60264 AC091951.1-201ENST00000512854 2465 ntBASIC19.44■□□□□ 0.7
SMARCA5O60264 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCA5O60264 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCA5O60264 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SMARCA5O60264 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SMARCA5O60264 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 RPL13P2-201ENST00000440687 659 ntBASIC19.43■□□□□ 0.7
SMARCA5O60264 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCA5O60264 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.43■□□□□ 0.7
SMARCA5O60264 AC004461.2-201ENST00000629517 803 ntBASIC19.43■□□□□ 0.7
SMARCA5O60264 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMARCA5O60264 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCA5O60264 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCA5O60264 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCA5O60264 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCA5O60264 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SMARCA5O60264 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SMARCA5O60264 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCA5O60264 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 UGT1A2P-201ENST00000454886 866 ntBASIC19.42■□□□□ 0.7
SMARCA5O60264 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCA5O60264 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCA5O60264 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.42■□□□□ 0.7
SMARCA5O60264 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SMARCA5O60264 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCA5O60264 MST1L-201ENST00000442552 2185 ntBASIC19.42■□□□□ 0.7
SMARCA5O60264 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCA5O60264 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SMARCA5O60264 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms