Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC100756.1-201ENST00000562736 682 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 RARRES2P5-201ENST00000564013 466 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 AC138749.3-201ENST00000567691 622 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.06■□□□□ 0.32
EXTL3O43909 AC116165.1-201ENST00000611806 668 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.06■□□□□ 0.32
EXTL3O43909 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.06■□□□□ 0.32
EXTL3O43909 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.06■□□□□ 0.32
EXTL3O43909 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.06■□□□□ 0.32
EXTL3O43909 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 AL121723.1-201ENST00000445194 1519 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EXTL3O43909 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
EXTL3O43909 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
EXTL3O43909 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
EXTL3O43909 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.05■□□□□ 0.32
EXTL3O43909 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.05■□□□□ 0.32
EXTL3O43909 MEP1AP4-201ENST00000423244 1087 ntBASIC17.05■□□□□ 0.32
EXTL3O43909 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
EXTL3O43909 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.05■□□□□ 0.32
EXTL3O43909 AC093004.1-201ENST00000508850 424 ntBASIC17.05■□□□□ 0.32
EXTL3O43909 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.05■□□□□ 0.32
EXTL3O43909 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
EXTL3O43909 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 AC004233.3-201ENST00000607794 1269 ntBASIC17.05■□□□□ 0.32
EXTL3O43909 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
EXTL3O43909 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.05■□□□□ 0.32
EXTL3O43909 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EXTL3O43909 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.04■□□□□ 0.32
EXTL3O43909 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
EXTL3O43909 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
EXTL3O43909 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EXTL3O43909 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
EXTL3O43909 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
EXTL3O43909 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.04■□□□□ 0.32
EXTL3O43909 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.04■□□□□ 0.32
EXTL3O43909 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EXTL3O43909 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.04■□□□□ 0.32
EXTL3O43909 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EXTL3O43909 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EXTL3O43909 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.04■□□□□ 0.32
EXTL3O43909 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms