Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.86■□□□□ 0.13
SMAD6O43541 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.86■□□□□ 0.13
SMAD6O43541 AL359711.2-201ENST00000563105 872 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.86■□□□□ 0.13
SMAD6O43541 AL049840.4-201ENST00000602422 811 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 AL033527.5-201ENST00000641382 801 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 AC092850.2-201ENST00000623821 2697 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.85■□□□□ 0.13
SMAD6O43541 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.85■□□□□ 0.13
SMAD6O43541 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
SMAD6O43541 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.85■□□□□ 0.13
SMAD6O43541 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.85■□□□□ 0.13
SMAD6O43541 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.85■□□□□ 0.13
SMAD6O43541 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.85■□□□□ 0.13
SMAD6O43541 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.85■□□□□ 0.13
SMAD6O43541 AL442647.2-201ENST00000429864 857 ntBASIC15.85■□□□□ 0.13
SMAD6O43541 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.85■□□□□ 0.13
SMAD6O43541 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.85■□□□□ 0.13
SMAD6O43541 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SMAD6O43541 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.85■□□□□ 0.13
SMAD6O43541 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.85■□□□□ 0.13
SMAD6O43541 HYMAI-201ENST00000635591 3347 ntBASIC15.85■□□□□ 0.13
SMAD6O43541 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SMAD6O43541 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.85■□□□□ 0.13
SMAD6O43541 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.85■□□□□ 0.13
SMAD6O43541 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMAD6O43541 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SMAD6O43541 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 KRT17P7-201ENST00000451704 1104 ntBASIC15.84■□□□□ 0.13
SMAD6O43541 AC011495.1-201ENST00000498085 584 ntBASIC15.84■□□□□ 0.13
SMAD6O43541 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.84■□□□□ 0.13
SMAD6O43541 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.84■□□□□ 0.13
SMAD6O43541 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.84■□□□□ 0.13
SMAD6O43541 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.84■□□□□ 0.13
SMAD6O43541 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 RPSAP52-203ENST00000622976 1023 ntBASIC15.84■□□□□ 0.13
SMAD6O43541 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.84■□□□□ 0.13
SMAD6O43541 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.84■□□□□ 0.13
SMAD6O43541 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMAD6O43541 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms