Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.78■□□□□ 0.6
FOXN1O15353 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
FOXN1O15353 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
FOXN1O15353 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
FOXN1O15353 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.78■□□□□ 0.6
FOXN1O15353 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 KRT90P-201ENST00000549264 1064 ntBASIC18.78■□□□□ 0.6
FOXN1O15353 AL359711.2-201ENST00000563105 872 ntBASIC18.78■□□□□ 0.6
FOXN1O15353 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXN1O15353 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXN1O15353 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXN1O15353 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXN1O15353 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.78■□□□□ 0.6
FOXN1O15353 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXN1O15353 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXN1O15353 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN1O15353 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
FOXN1O15353 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN1O15353 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXN1O15353 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXN1O15353 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FOXN1O15353 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN1O15353 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN1O15353 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
FOXN1O15353 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
FOXN1O15353 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
FOXN1O15353 AC104784.1-201ENST00000473096 294 ntBASIC18.77■□□□□ 0.6
FOXN1O15353 RN7SL720P-201ENST00000488178 304 ntBASIC18.77■□□□□ 0.6
FOXN1O15353 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.77■□□□□ 0.6
FOXN1O15353 AC245884.6-201ENST00000515672 1067 ntBASIC18.77■□□□□ 0.6
FOXN1O15353 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXN1O15353 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXN1O15353 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXN1O15353 RN7SL555P-201ENST00000584742 339 ntBASIC18.77■□□□□ 0.6
FOXN1O15353 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.77■□□□□ 0.6
FOXN1O15353 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN1O15353 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN1O15353 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN1O15353 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN1O15353 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN1O15353 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN1O15353 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN1O15353 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN1O15353 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
FOXN1O15353 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXN1O15353 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FOXN1O15353 KRT8P39-201ENST00000396270 1433 ntBASIC18.76■□□□□ 0.59
FOXN1O15353 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXN1O15353 RPL13AP19-201ENST00000434320 584 ntBASIC18.76■□□□□ 0.59
FOXN1O15353 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXN1O15353 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXN1O15353 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXN1O15353 EEF1DP1-201ENST00000585891 896 ntBASIC18.76■□□□□ 0.59
FOXN1O15353 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.76■□□□□ 0.59
FOXN1O15353 AC148477.9-201ENST00000623974 539 ntBASIC18.76■□□□□ 0.59
FOXN1O15353 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN1O15353 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms