Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 AC134312.5-201ENST00000568031 1313 ntBASIC17.98■□□□□ 0.47
ATP2A1O14983 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ATP2A1O14983 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP2A1O14983 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 AC092658.1-201ENST00000505836 891 ntBASIC17.97■□□□□ 0.47
ATP2A1O14983 AL583810.1-201ENST00000553344 1045 ntBASIC17.97■□□□□ 0.47
ATP2A1O14983 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP2A1O14983 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP2A1O14983 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ATP2A1O14983 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP2A1O14983 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 MSTO2P-201ENST00000314835 1709 ntBASIC17.97■□□□□ 0.47
ATP2A1O14983 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP2A1O14983 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP2A1O14983 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATP2A1O14983 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP2A1O14983 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A1O14983 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP2A1O14983 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 AC099336.1-201ENST00000417053 1171 ntBASIC17.96■□□□□ 0.47
ATP2A1O14983 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.96■□□□□ 0.47
ATP2A1O14983 AC007551.1-201ENST00000457394 519 ntBASIC17.96■□□□□ 0.47
ATP2A1O14983 RNA5SP412-201ENST00000516234 123 ntBASIC17.96■□□□□ 0.47
ATP2A1O14983 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP2A1O14983 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.96■□□□□ 0.47
ATP2A1O14983 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP2A1O14983 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2A1O14983 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2A1O14983 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.96■□□□□ 0.47
ATP2A1O14983 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP2A1O14983 AC107373.2-201ENST00000607735 490 ntBASIC17.96■□□□□ 0.47
ATP2A1O14983 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP2A1O14983 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2A1O14983 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A1O14983 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A1O14983 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2A1O14983 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.96■□□□□ 0.46
ATP2A1O14983 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2A1O14983 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2A1O14983 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 AC069224.1-201ENST00000566372 1715 ntBASIC17.95■□□□□ 0.46
ATP2A1O14983 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A1O14983 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A1O14983 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms