Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAMP3O14828 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAMP3O14828 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP3O14828 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAMP3O14828 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP3O14828 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP3O14828 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAMP3O14828 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 CU634019.7-201ENST00000624153 1185 ntBASIC16.3■□□□□ 0.2
SCAMP3O14828 FP236241.2-201ENST00000624906 1185 ntBASIC16.3■□□□□ 0.2
SCAMP3O14828 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP3O14828 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP3O14828 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SCAMP3O14828 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SCAMP3O14828 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP3O14828 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCAMP3O14828 FER1L4-210ENST00000615531 5998 ntBASIC16.29■□□□□ 0.2
SCAMP3O14828 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP3O14828 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.29■□□□□ 0.2
SCAMP3O14828 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 VDAC1P7-201ENST00000462417 847 ntBASIC16.29■□□□□ 0.2
SCAMP3O14828 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.29■□□□□ 0.2
SCAMP3O14828 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP3O14828 SNX29P1-201ENST00000548357 1007 ntBASIC16.29■□□□□ 0.2
SCAMP3O14828 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP3O14828 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAMP3O14828 AC017083.2-201ENST00000608069 979 ntBASIC16.29■□□□□ 0.2
SCAMP3O14828 AL162274.1-201ENST00000617191 1098 ntBASIC16.29■□□□□ 0.2
SCAMP3O14828 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP3O14828 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP3O14828 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP3O14828 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP3O14828 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP3O14828 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP3O14828 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP3O14828 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP3O14828 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 AC007389.4-201ENST00000454674 793 ntBASIC16.28■□□□□ 0.2
SCAMP3O14828 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP3O14828 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.28■□□□□ 0.2
SCAMP3O14828 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.28■□□□□ 0.2
SCAMP3O14828 MIR4259-201ENST00000584466 101 ntBASIC16.28■□□□□ 0.2
SCAMP3O14828 AL512343.1-201ENST00000605837 169 ntBASIC16.28■□□□□ 0.2
SCAMP3O14828 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.28■□□□□ 0.2
SCAMP3O14828 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SCAMP3O14828 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
SCAMP3O14828 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCAMP3O14828 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCAMP3O14828 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP3O14828 AC024909.3-201ENST00000611513 2257 ntBASIC16.28■□□□□ 0.2
SCAMP3O14828 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAMP3O14828 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms