Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3B1O00203 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3B1O00203 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3B1O00203 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3B1O00203 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.97■□□□□ 0.15
AP3B1O00203 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3B1O00203 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
AP3B1O00203 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.96■□□□□ 0.15
AP3B1O00203 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
AP3B1O00203 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
AP3B1O00203 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3B1O00203 RPSAP43-201ENST00000402237 625 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 AC254562.1-201ENST00000417586 456 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.96■□□□□ 0.15
AP3B1O00203 GPS2P2-201ENST00000430745 888 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3B1O00203 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 SPDYE14P-201ENST00000442619 822 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 AC112482.1-201ENST00000492080 688 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3B1O00203 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
AP3B1O00203 BANF1P1-201ENST00000553684 263 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 AC093520.2-201ENST00000561830 333 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 AC026150.2-201ENST00000564693 1156 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 AP001059.3-201ENST00000619053 235 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
AP3B1O00203 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3B1O00203 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 AC112693.3-201ENST00000624819 1983 ntBASIC15.96■□□□□ 0.15
AP3B1O00203 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3B1O00203 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.96■□□□□ 0.14
AP3B1O00203 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3B1O00203 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
AP3B1O00203 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3B1O00203 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3B1O00203 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.96■□□□□ 0.14
AP3B1O00203 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
AP3B1O00203 AL607033.1-201ENST00000623900 1599 ntBASIC15.96■□□□□ 0.14
AP3B1O00203 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3B1O00203 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
AP3B1O00203 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 AC138035.3-201ENST00000622706 2791 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.95■□□□□ 0.14
AP3B1O00203 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3B1O00203 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
AP3B1O00203 AC211486.1-202ENST00000416371 468 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3B1O00203 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.95■□□□□ 0.14
AP3B1O00203 SERBP1P3-201ENST00000459980 809 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 AC211476.1-201ENST00000503899 468 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.95■□□□□ 0.14
AP3B1O00203 AL512356.2-201ENST00000546955 174 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 MIR6069-201ENST00000620069 79 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP3B1O00203 KRT8P44-201ENST00000441609 1350 ntBASIC15.95■□□□□ 0.14
AP3B1O00203 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
AP3B1O00203 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3B1O00203 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
AP3B1O00203 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP3B1O00203 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms