Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.12■□□□□ 0.01
PDLIM1O00151 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PDLIM1O00151 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PDLIM1O00151 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 AC009947.1-201ENST00000444350 727 ntBASIC15.12■□□□□ 0.01
PDLIM1O00151 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.12■□□□□ 0.01
PDLIM1O00151 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 AC034105.1-201ENST00000563488 319 ntBASIC15.12■□□□□ 0.01
PDLIM1O00151 AC106730.1-201ENST00000566722 1090 ntBASIC15.12■□□□□ 0.01
PDLIM1O00151 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 Z83851.2-201ENST00000609564 659 ntBASIC15.12■□□□□ 0.01
PDLIM1O00151 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PDLIM1O00151 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.12■□□□□ 0.01
PDLIM1O00151 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PDLIM1O00151 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 AC117489.1-201ENST00000625169 3217 ntBASIC15.11■□□□□ 0.01
PDLIM1O00151 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.11■□□□□ 0.01
PDLIM1O00151 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PDLIM1O00151 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.11■□□□□ 0.01
PDLIM1O00151 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.11■□□□□ 0.01
PDLIM1O00151 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.11■□□□□ 0.01
PDLIM1O00151 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.11■□□□□ 0.01
PDLIM1O00151 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.11■□□□□ 0.01
PDLIM1O00151 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 AF228730.7-201ENST00000641842 219 ntBASIC15.11■□□□□ 0.01
PDLIM1O00151 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 AC013726.1-201ENST00000563747 2285 ntBASIC15.11■□□□□ 0.01
PDLIM1O00151 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.11■□□□□ 0.01
PDLIM1O00151 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDLIM1O00151 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDLIM1O00151 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms