Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 EGFEM1P-202ENST00000431685 1563 ntBASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 NBPF21P-201ENST00000425093 1451 ntBASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 C18orf15-201ENST00000623680 2534 ntBASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AC015909.5-201ENST00000624336 2266 ntBASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 HARS-203ENST00000431330 1774 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 NME6-213ENST00000451657 871 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 INTS4P1-203ENST00000641008 3683 ntBASIC8.72□□□□□ -1.01
CHKB-CPT1BH3BT56 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC8.71□□□□□ -1.01
CHKB-CPT1BH3BT56 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms