Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 BOLA2P3-201ENST00000404566 256 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 USP32P1-208ENST00000506594 1164 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 PTP4A1P2-201ENST00000546033 454 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 AP005482.1-201ENST00000563722 1273 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 AC120045.2-201ENST00000567334 178 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 RPSAP52-203ENST00000622976 1023 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 AC018695.7-201ENST00000624587 2492 ntBASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 KRT223P-202ENST00000449164 1292 ntBASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 AC104989.1-201ENST00000519711 778 ntBASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 AC124283.3-201ENST00000570869 594 ntBASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 MIR5189-201ENST00000577370 114 ntBASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 AL022328.1-201ENST00000610050 478 ntBASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3FA6NER0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 AP003680.1-201ENST00000598970 3660 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 BCRP2-202ENST00000447763 634 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 BCRP6-201ENST00000510112 632 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 BCRP7-201ENST00000511549 544 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 MIR4259-201ENST00000584466 101 ntBASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3FA6NER0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms