Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 IGLL3P-201ENST00000412472 434 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 HNRNPDP1-201ENST00000439535 754 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 HCG4P8-203ENST00000443049 980 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 SAPCD2P3-201ENST00000455031 850 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 PRYP6-201ENST00000514804 343 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 AC061975.2-201ENST00000581722 295 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.76□□□□□ -0.21
SHISA3A0PJX4 AL136982.4-201ENST00000437689 1740 ntBASIC13.76□□□□□ -0.21
SHISA3A0PJX4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC105339.3-201ENST00000560043 636 ntBASIC13.75□□□□□ -0.21
SHISA3A0PJX4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AL121772.3-201ENST00000610840 674 ntBASIC13.75□□□□□ -0.21
SHISA3A0PJX4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC005593.1-201ENST00000624894 515 ntBASIC13.75□□□□□ -0.21
SHISA3A0PJX4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 REXO1L2P-201ENST00000425429 2069 ntBASIC13.75□□□□□ -0.21
SHISA3A0PJX4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC018529.2-202ENST00000611482 3087 ntBASIC13.75□□□□□ -0.21
SHISA3A0PJX4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.75□□□□□ -0.21
SHISA3A0PJX4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHISA3A0PJX4 WASH3P-207ENST00000560956 1394 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms