Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 MIR1233-2-201ENST00000408138 82 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 MIR1233-1-201ENST00000408722 82 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AC004967.1-201ENST00000453589 447 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AC023141.5-201ENST00000458585 616 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AC026979.3-201ENST00000607315 403 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 CICP13-201ENST00000422015 2789 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC007292.2-201ENST00000593524 1812 ntBASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC112504.1-201ENST00000623415 1841 ntBASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 ALG1L8P-201ENST00000533887 760 ntBASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 AC009093.7-201ENST00000623853 1223 ntBASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HLA-DRB4X5D2U9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 AC011477.6-201ENST00000604980 1927 ntBASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.96□□□□□ -0.5
HLA-DRB4X5D2U9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms