Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 CLK3P2-201ENST00000427566 1453 ntBASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 HIST3H2BA-201ENST00000436555 524 ntBASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AC119751.2-201ENST00000504529 210 ntBASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AC006538.1-201ENST00000567905 1585 ntBASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 CYP4F24P-201ENST00000586049 1580 ntBASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGA9Q9Y5G4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 MIR4259-201ENST00000584466 101 ntBASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 AL033527.4-201ENST00000641026 673 ntBASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 PCGF3-213ENST00000620529 1899 ntBASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 LINC01144-201ENST00000626198 1710 ntBASIC14.78□□□□□ -0.04
PCDHGA9Q9Y5G4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 Z97205.2-201ENST00000564697 1639 ntBASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDHGA9Q9Y5G4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 AC104989.1-201ENST00000519711 778 ntBASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA9Q9Y5G4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms