Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC244107.1-201ENST00000442033 332 ntBASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AL162727.3-201ENST00000635661 2787 ntBASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AP003680.1-201ENST00000598970 3660 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 PCDHB19P-201ENST00000570871 2371 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AL442647.2-201ENST00000429864 857 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 TTTY23B-201ENST00000442790 549 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 KRT18P43-201ENST00000469825 1281 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 MIR4313-201ENST00000580760 101 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AC133539.2-201ENST00000604757 467 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 FLJ16779-201ENST00000612722 7638 ntBASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 AL121723.1-201ENST00000445194 1519 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms