Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 MIR4313-201ENST00000580760 101 ntBASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AL033527.5-201ENST00000641382 801 ntBASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE7Q9UBL6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 GK-202ENST00000378941 458 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AL442647.2-201ENST00000429864 857 ntBASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 RN7SL837P-201ENST00000463010 287 ntBASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE7Q9UBL6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms