Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TSSK5P-201ENST00000423978 907 ntBASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 SERBP1P3-201ENST00000459980 809 ntBASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 AC010336.2-201ENST00000564226 506 ntBASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 AL844908.2-201ENST00000609461 460 ntBASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.32■□□□□ 0.04
CUEDC1Q9NWM3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 CICP13-201ENST00000422015 2789 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 NME2P1-201ENST00000426182 414 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC241585.1-201ENST00000433527 519 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 UGT1A2P-201ENST00000454886 866 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 RN7SL618P-201ENST00000477850 296 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MIR4313-201ENST00000580760 101 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 MIR6069-201ENST00000620069 79 ntBASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.31■□□□□ 0.04
CUEDC1Q9NWM3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 AC087499.5-201ENST00000452760 1342 ntBASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 AC022494.1-201ENST00000466044 728 ntBASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CUEDC1Q9NWM3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms