Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AJ011932.1-201ENST00000621707 465 ntBASIC16.8■□□□□ 0.28
CISHQ9NSE2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CISHQ9NSE2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CISHQ9NSE2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CISHQ9NSE2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.8■□□□□ 0.28
CISHQ9NSE2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CISHQ9NSE2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CISHQ9NSE2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.8■□□□□ 0.28
CISHQ9NSE2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.8■□□□□ 0.28
CISHQ9NSE2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TOMM22P5-201ENST00000416399 439 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 AL589987.1-201ENST00000453380 819 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 AC104794.3-201ENST00000566840 1248 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 AC011467.4-201ENST00000594891 528 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 SRD5A3P1-201ENST00000603021 949 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 AL096865.1-201ENST00000606796 927 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 AC004790.1-201ENST00000612686 536 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.79■□□□□ 0.28
CISHQ9NSE2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CISHQ9NSE2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 AC087481.3-201ENST00000602886 1894 ntBASIC16.78■□□□□ 0.28
CISHQ9NSE2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CISHQ9NSE2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CISHQ9NSE2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms