Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 RPL5P21-201ENST00000404620 815 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC106760.1-201ENST00000508690 800 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AL512343.1-201ENST00000605837 169 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AC087481.3-201ENST00000602886 1894 ntBASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 CICP6-201ENST00000457191 2729 ntBASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 TDH-203ENST00000531764 1110 ntBASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.91□□□□□ -0.18
KIAA1549Q9HCM3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KIAA1549Q9HCM3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms