Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 RPS8P6-201ENST00000426177 609 ntBASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 RARRES2P9-201ENST00000565168 469 ntBASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 AC010327.4-202ENST00000591484 748 ntBASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 AC084121.4-201ENST00000641598 221 ntBASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 AF228730.8-201ENST00000642140 221 ntBASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC68Q9H2F9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AL353705.2-201ENST00000428243 662 ntBASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 BNIP3P1-202ENST00000550043 1585 ntBASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AC092384.3-202ENST00000564646 2873 ntBASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC68Q9H2F9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 YBX1P5-201ENST00000509441 847 ntBASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AP000344.2-201ENST00000512987 629 ntBASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AC004835.2-201ENST00000603762 682 ntBASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 AL513210.1-201ENST00000629608 234 ntBASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 DBET-201ENST00000630918 3363 ntBASIC15.89■□□□□ 0.13
CCDC68Q9H2F9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms