Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL513190.1-201ENST00000621254 727 ntBASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AC112693.3-201ENST00000624819 1983 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 MED15P5-201ENST00000423150 992 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AL671277.1-201ENST00000429656 993 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 EEF1DP4-201ENST00000446006 880 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 KRT8P23-201ENST00000560090 1207 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AC026979.3-201ENST00000607315 403 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 BX640515.1-201ENST00000617215 977 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 C18orf15-201ENST00000623680 2534 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR2J3Q9H1A7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.65□□□□□ -0.07
POLR2J3Q9H1A7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 BNIP3P1-202ENST00000550043 1585 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 REXO1L1P-202ENST00000608646 1974 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms