Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AC126915.1-201ENST00000522847 1038 ntBASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AC016629.1-201ENST00000596579 586 ntBASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 AL023775.1-201ENST00000454907 1746 ntBASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTFDC1Q9BY42 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 TPM3P8-201ENST00000330554 643 ntBASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 CHMP4BP1-201ENST00000556017 588 ntBASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 AL451050.2-201ENST00000606967 682 ntBASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 HCG11-201ENST00000411553 5696 ntBASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 AL354989.2-201ENST00000435838 1540 ntBASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTFDC1Q9BY42 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTFDC1Q9BY42 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTFDC1Q9BY42 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.89■□□□□ 0.62
RTFDC1Q9BY42 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTFDC1Q9BY42 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
RTFDC1Q9BY42 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms