Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 SSR4P1-203ENST00000599569 2260 ntBASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AC004987.2-201ENST00000395959 1148 ntBASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 AC027612.4-201ENST00000605371 583 ntBASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 MIR600HG-201ENST00000449175 5984 ntBASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
YIPF4Q9BSR8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 AC126177.1-201ENST00000547829 2218 ntBASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 FAM8A3P-201ENST00000427218 844 ntBASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.91□□□□□ -0.02
YIPF4Q9BSR8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms