Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC027369.6-201ENST00000525520 931 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 SNX18-202ENST00000343017 3140 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.25□□□□□ -0.13
USB1Q9BQ65 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AC090953.1-201ENST00000604305 1092 ntBASIC14.25□□□□□ -0.13
USB1Q9BQ65 RN7SL828P-201ENST00000607615 303 ntBASIC14.25□□□□□ -0.13
USB1Q9BQ65 PAUPAR-201ENST00000630360 2965 ntBASIC14.25□□□□□ -0.13
USB1Q9BQ65 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 AC079328.2-201ENST00000561241 3354 ntBASIC14.25□□□□□ -0.13
USB1Q9BQ65 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.25□□□□□ -0.13
USB1Q9BQ65 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
USB1Q9BQ65 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms