Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN18Q99952 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPN18Q99952 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN18Q99952 EIF3FP3-201ENST00000434851 1086 ntBASIC17.79■□□□□ 0.44
PTPN18Q99952 AL596276.2-201ENST00000447525 331 ntBASIC17.79■□□□□ 0.44
PTPN18Q99952 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 IQSEC3P1-201ENST00000538799 536 ntBASIC17.79■□□□□ 0.44
PTPN18Q99952 ZACNP1-201ENST00000612259 710 ntBASIC17.79■□□□□ 0.44
PTPN18Q99952 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN18Q99952 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN18Q99952 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN18Q99952 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN18Q99952 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN18Q99952 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN18Q99952 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
PTPN18Q99952 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPN18Q99952 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN18Q99952 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN18Q99952 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPN18Q99952 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AC104784.1-201ENST00000473096 294 ntBASIC17.78■□□□□ 0.44
PTPN18Q99952 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN18Q99952 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AC026740.1-201ENST00000607068 791 ntBASIC17.78■□□□□ 0.44
PTPN18Q99952 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN18Q99952 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN18Q99952 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN18Q99952 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN18Q99952 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PTPN18Q99952 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 AC018695.7-201ENST00000624587 2492 ntBASIC17.77■□□□□ 0.44
PTPN18Q99952 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 AC011477.6-201ENST00000604980 1927 ntBASIC17.77■□□□□ 0.44
PTPN18Q99952 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PTPN18Q99952 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
PTPN18Q99952 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PTPN18Q99952 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN18Q99952 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 AC007274.2-201ENST00000421675 662 ntBASIC17.77■□□□□ 0.44
PTPN18Q99952 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN18Q99952 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN18Q99952 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN18Q99952 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
PTPN18Q99952 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN18Q99952 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN18Q99952 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN18Q99952 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN18Q99952 AC100757.4-201ENST00000626934 759 ntBASIC17.77■□□□□ 0.44
PTPN18Q99952 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
PTPN18Q99952 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PTPN18Q99952 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PTPN18Q99952 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN18Q99952 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN18Q99952 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms