Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 WASH6P-202ENST00000359512 1437 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 RBM17P3-201ENST00000417687 1192 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 SLC25A6P2-201ENST00000497974 877 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 NKAPP1-205ENST00000585790 367 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 AC008608.2-201ENST00000606089 416 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 AL139424.1-201ENST00000607572 797 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 AC012313.10-201ENST00000623509 926 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 AL022326.1-202ENST00000641533 845 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 AC005252.3-201ENST00000623855 2258 ntBASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 AC106795.1-205ENST00000512851 1056 ntBASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 AC107918.2-201ENST00000530817 355 ntBASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 AC005412.3-201ENST00000580309 715 ntBASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 AL139288.1-201ENST00000623748 933 ntBASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CHMP6Q96FZ7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP6Q96FZ7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms