Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 ZBED1P1-201ENST00000502364 1930 ntBASIC12.11□□□□□ -0.47
SMIM12Q96EX1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM12Q96EX1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 PMS2P4-201ENST00000412466 1052 ntBASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 TPSP2-201ENST00000561760 610 ntBASIC12.1□□□□□ -0.47
SMIM12Q96EX1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MIR4321-201ENST00000592276 80 ntBASIC12.1□□□□□ -0.47
SMIM12Q96EX1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AC005912.2-201ENST00000619492 2400 ntBASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AJ011931.1-201ENST00000618749 2492 ntBASIC12.1□□□□□ -0.47
SMIM12Q96EX1 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SMIM12Q96EX1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SMIM12Q96EX1 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms