Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 MIR4313-201ENST00000580760 101 ntBASIC15.24■□□□□ 0.03
VPS33AQ96AX1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 CICP23-201ENST00000605013 2741 ntBASIC15.24■□□□□ 0.03
VPS33AQ96AX1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 AC023908.3-201ENST00000564211 3047 ntBASIC15.24■□□□□ 0.03
VPS33AQ96AX1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.24■□□□□ 0.03
VPS33AQ96AX1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS33AQ96AX1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AGAP7P-201ENST00000582299 2062 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AGAP14-201ENST00000624701 2060 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AC127383.1-201ENST00000444697 1800 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AC004870.1-201ENST00000315132 882 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AL138918.1-201ENST00000568306 659 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 REXO1L1P-202ENST00000608646 1974 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AL691432.1-201ENST00000596308 1422 ntBASIC15.23■□□□□ 0.03
VPS33AQ96AX1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS33AQ96AX1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS33AQ96AX1 AC093909.1-201ENST00000504731 1122 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms