Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 API5-211ENST00000534695 560 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC104794.3-201ENST00000566840 1248 ntBASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 MIR6069-201ENST00000620069 79 ntBASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TM9SF4Q92544 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TM9SF4Q92544 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TM9SF4Q92544 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TM9SF4Q92544 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TM9SF4Q92544 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TM9SF4Q92544 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 ATP5G2P4-201ENST00000442175 420 ntBASIC14.95□□□□□ -0.02
TM9SF4Q92544 RN7SL752P-201ENST00000463779 287 ntBASIC14.95□□□□□ -0.02
TM9SF4Q92544 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 SDHAP3-202ENST00000515467 728 ntBASIC14.95□□□□□ -0.02
TM9SF4Q92544 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AC004840.1-201ENST00000636359 365 ntBASIC14.95□□□□□ -0.02
TM9SF4Q92544 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AL589702.1-201ENST00000641229 1509 ntBASIC14.95□□□□□ -0.02
TM9SF4Q92544 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 AC006449.6-201ENST00000612330 2296 ntBASIC14.95□□□□□ -0.02
TM9SF4Q92544 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TM9SF4Q92544 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.95□□□□□ -0.02
TM9SF4Q92544 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC013268.4-201ENST00000637413 2228 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 SPDYE19P-201ENST00000338590 713 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AL139010.1-201ENST00000454878 894 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC055876.2-201ENST00000531834 546 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms