Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC44A1Q8WWI5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 AC092865.6-201ENST00000642101 219 ntBASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 AC067930.6-201ENST00000623257 4947 ntBASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC44A1Q8WWI5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC44A1Q8WWI5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC44A1Q8WWI5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SLC44A1Q8WWI5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC44A1Q8WWI5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC44A1Q8WWI5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 MIR346-201ENST00000362234 95 ntBASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 AL671277.1-201ENST00000429656 993 ntBASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC44A1Q8WWI5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC44A1Q8WWI5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms