Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTL9Q8NET4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 AC006449.5-201ENST00000610658 2098 ntBASIC19.26■□□□□ 0.67
RTL9Q8NET4 AL138799.1-201ENST00000448213 1675 ntBASIC19.26■□□□□ 0.67
RTL9Q8NET4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 AP001582.1-201ENST00000525856 295 ntBASIC19.26■□□□□ 0.67
RTL9Q8NET4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 AC244093.1-201ENST00000610837 814 ntBASIC19.26■□□□□ 0.67
RTL9Q8NET4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RTL9Q8NET4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTL9Q8NET4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 AL118508.1-201ENST00000613502 2345 ntBASIC19.25■□□□□ 0.67
RTL9Q8NET4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 BCYRN1-201ENST00000418539 200 ntBASIC19.25■□□□□ 0.67
RTL9Q8NET4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 ZNF767P-206ENST00000513792 565 ntBASIC19.25■□□□□ 0.67
RTL9Q8NET4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 AC079316.1-201ENST00000548397 411 ntBASIC19.25■□□□□ 0.67
RTL9Q8NET4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 AC025181.2-201ENST00000606994 802 ntBASIC19.25■□□□□ 0.67
RTL9Q8NET4 RHOXF1P1-202ENST00000635473 501 ntBASIC19.25■□□□□ 0.67
RTL9Q8NET4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL9Q8NET4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
RTL9Q8NET4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 BRWD1P1-201ENST00000401091 371 ntBASIC19.24■□□□□ 0.67
RTL9Q8NET4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 AL603832.2-201ENST00000566195 2125 ntBASIC19.24■□□□□ 0.67
RTL9Q8NET4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL9Q8NET4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL9Q8NET4 AL138709.1-201ENST00000614840 1693 ntBASIC19.23■□□□□ 0.67
RTL9Q8NET4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms