Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 KRT17P7-201ENST00000451704 1104 ntBASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 CICP13-201ENST00000422015 2789 ntBASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AP005117.1-202ENST00000581724 1908 ntBASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AL080243.2-201ENST00000418783 582 ntBASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AL365330.1-201ENST00000607459 531 ntBASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC33Q8N5R6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 AL136982.4-201ENST00000437689 1740 ntBASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 TP53TG3HP-202ENST00000569755 579 ntBASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC33Q8N5R6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC33Q8N5R6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms