Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SLF2Q8IX21 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLF2Q8IX21 AL662844.4-201ENST00000606367 2838 ntBASIC18.73■□□□□ 0.59
SLF2Q8IX21 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLF2Q8IX21 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 ANKRD19P-201ENST00000338192 862 ntBASIC18.72■□□□□ 0.59
SLF2Q8IX21 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 AC092933.1-201ENST00000393644 945 ntBASIC18.72■□□□□ 0.59
SLF2Q8IX21 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 AC016694.1-201ENST00000434179 700 ntBASIC18.72■□□□□ 0.59
SLF2Q8IX21 RPL7P3-201ENST00000441388 714 ntBASIC18.72■□□□□ 0.59
SLF2Q8IX21 AC007551.1-201ENST00000457394 519 ntBASIC18.72■□□□□ 0.59
SLF2Q8IX21 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 GAPDHP40-201ENST00000505218 1006 ntBASIC18.72■□□□□ 0.59
SLF2Q8IX21 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLF2Q8IX21 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.72■□□□□ 0.59
SLF2Q8IX21 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 AP001582.1-201ENST00000525856 295 ntBASIC18.71■□□□□ 0.59
SLF2Q8IX21 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 MIR6799-201ENST00000620297 69 ntBASIC18.71■□□□□ 0.59
SLF2Q8IX21 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLF2Q8IX21 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLF2Q8IX21 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SLF2Q8IX21 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 AC079328.2-201ENST00000561241 3354 ntBASIC18.7■□□□□ 0.58
SLF2Q8IX21 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLF2Q8IX21 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.7■□□□□ 0.58
SLF2Q8IX21 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 FO681548.1-201ENST00000455617 1132 ntBASIC18.7■□□□□ 0.58
SLF2Q8IX21 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 KRT18P25-201ENST00000508931 1278 ntBASIC18.7■□□□□ 0.58
SLF2Q8IX21 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.7■□□□□ 0.58
SLF2Q8IX21 AP000812.2-201ENST00000538934 718 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms