Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 BTBD6P1-201ENST00000412176 1267 ntBASIC17.01■□□□□ 0.31
HERC6Q8IVU3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AC007969.1-201ENST00000433675 447 ntBASIC17.01■□□□□ 0.31
HERC6Q8IVU3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AL591846.1-201ENST00000451736 433 ntBASIC17.01■□□□□ 0.31
HERC6Q8IVU3 POU5F1P6-201ENST00000466990 990 ntBASIC17.01■□□□□ 0.31
HERC6Q8IVU3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HERC6Q8IVU3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17■□□□□ 0.31
HERC6Q8IVU3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17■□□□□ 0.31
HERC6Q8IVU3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 AKR7A2P1-201ENST00000460134 915 ntBASIC17■□□□□ 0.31
HERC6Q8IVU3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17■□□□□ 0.31
HERC6Q8IVU3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 AC026410.3-201ENST00000514280 936 ntBASIC17■□□□□ 0.31
HERC6Q8IVU3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17■□□□□ 0.31
HERC6Q8IVU3 ACTG1P17-201ENST00000558391 1119 ntBASIC17■□□□□ 0.31
HERC6Q8IVU3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17■□□□□ 0.31
HERC6Q8IVU3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17■□□□□ 0.31
HERC6Q8IVU3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17■□□□□ 0.31
HERC6Q8IVU3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERC6Q8IVU3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17■□□□□ 0.31
HERC6Q8IVU3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 FAM197Y7-201ENST00000432892 766 ntBASIC16.99■□□□□ 0.31
HERC6Q8IVU3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.99■□□□□ 0.31
HERC6Q8IVU3 PHKG1P2-201ENST00000457537 863 ntBASIC16.99■□□□□ 0.31
HERC6Q8IVU3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms