Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 AF186996.4-201ENST00000467186 377 ntBASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 AL445228.2-201ENST00000605589 952 ntBASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 AL691432.1-201ENST00000596308 1422 ntBASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 BNIP3P1-202ENST00000550043 1585 ntBASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.75■□□□□ 0.11
NUDCD3Q8IVD9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 CRYGEP-201ENST00000412192 528 ntBASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 IGLL3P-201ENST00000412472 434 ntBASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NUDCD3Q8IVD9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 FGD5P1-202ENST00000614866 2498 ntBASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 AC023024.2-201ENST00000623561 1993 ntBASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUDCD3Q8IVD9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms