Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST3H2AQ7L7L0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 FOXO1B-201ENST00000504678 1527 ntBASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 MIR346-201ENST00000362234 95 ntBASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AL139010.1-201ENST00000454878 894 ntBASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 PGAM5P1-201ENST00000518923 814 ntBASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HIST3H2AQ7L7L0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 ADH5P3-201ENST00000433842 1137 ntBASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 AC005237.2-201ENST00000434368 219 ntBASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 LINC01225-203ENST00000563550 1244 ntBASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 MIR3687-2-201ENST00000577708 61 ntBASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 MIR3687-1-201ENST00000614492 61 ntBASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.46□□□□□ -0.09
HIST3H2AQ7L7L0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms