Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 RPL13P2-201ENST00000440687 659 ntBASIC15.16■□□□□ 0.02
RNF44Q7L0R7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 TERF1P3-201ENST00000505638 1227 ntBASIC15.16■□□□□ 0.02
RNF44Q7L0R7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 SRD5A3P1-201ENST00000603021 949 ntBASIC15.16■□□□□ 0.02
RNF44Q7L0R7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 LINC01115-203ENST00000606068 577 ntBASIC15.15■□□□□ 0.02
RNF44Q7L0R7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF44Q7L0R7 AL607033.1-201ENST00000623900 1599 ntBASIC15.15■□□□□ 0.02
RNF44Q7L0R7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF44Q7L0R7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms